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Hardware
- SGI Origin 2000 Supercomputer with 32 processors
- Sun Enterprise E250 server with dual processors
- Sun E280R server with dual processors
- 2 Sun Blade1000 servers with dual processors
- Mac and PC Workstations
- Automated Back tape up
- HP Plotter Printer
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Software List
SAS 9.1.3 sp1, GeneSpring, R
Polybayes_3_0, Repeat Masker, Consed, Emboss, Glimmer, Matlab, PTA, Phred/Phrap,
Staden, CAP 3, NCBI BLAST, HT BLAST, GRIDBLAST (PBS Queing Through Web),
image, QTL Cartographer, Flip
Pipeline, Estima, Magicmirror, GridCluster, Decypher, and various in house tools.
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Database Systems
All internal and external projects, applications, data management,
and web tools theat require a relational database
NCBI, TiGR, Swissprot, TiAR, KEGG, UniGENE, EST
Mirrored Databases are using magic mirror. This list
not all inclusive. We can downlaod and mirror others as
requested.
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Bioinformatics Unit
Jyothi Thimmapuram, Ph.D.
330 Edward R. Madigan Laboratory, 1201 W. Gregory Drive, Urbana, IL 61801
Phone: (217) 244-7355 FAX: (217) 265-5066
Email: jyothit@uiuc.edu
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| Last edited:
12 FEB 2008
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